Grouping methods

Classes

class lipyds.leafletfinder.grouping.GraphMethod(headgroups: MDAnalysis.core.groups.AtomGroup, tailgroups: Optional[MDAnalysis.core.groups.AtomGroup] = None, cutoff: float = 15.0, pbc: bool = False, sparse: Optional[bool] = None, **kwargs)[source]
class lipyds.leafletfinder.grouping.SpectralClusteringMethod(headgroups: MDAnalysis.core.groups.AtomGroup, tailgroups: Optional[MDAnalysis.core.groups.AtomGroup] = None, cutoff: float = 30.0, pbc: bool = False, n_leaflets: int = 2, delta: Optional[float] = 20, cosine_threshold: float = 0.8, angle_factor: float = 1, **kwargs)[source]